dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000105_2|CGC7
Gene ID: MGYG000000105_01256
Location and strand information: 435877 - 436521 (+)
Family: 3.A.1.12.5
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000000105_2|CGC7
Gene ID: MGYG000000105_01257
Location and strand information: 436544 - 437761 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000105_2|CGC7
Gene ID: MGYG000000105_01258
Location and strand information: 437796 - 439142 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.5995
Protein molecular weight: 50466.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000105_2|CGC7
Gene ID: MGYG000000105_01259
Location and strand information: 439195 - 441948 (-)
Family: PL40
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.668
Protein molecular weight: 103217.18
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000105_2|CGC7
Gene ID: MGYG000000105_01260
Location and strand information: 442042 - 446130 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000000105_2|CGC7
Gene ID: MGYG000000105_01261
Location and strand information: 446456 - 449599 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000000105_2|CGC7
Gene ID: MGYG000000105_01262
Location and strand information: 449621 - 451354 (+)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000000105_2|CGC7
Gene ID: MGYG000000105_01263
Location and strand information: 451370 - 452770 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000105_2|CGC7
Gene ID: MGYG000000105_01264
Location and strand information: 452799 - 455114 (+)
Family: GH10|3.2.1.8|CBM4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.3061
Protein molecular weight: 87013.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000105_2|CGC7
Gene ID: MGYG000000105_01265
Location and strand information: 455387 - 457123 (+)
Family: GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.3432
Protein molecular weight: 65864.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000105_2|CGC7
Gene ID: MGYG000000105_01266
Location and strand information: 457159 - 458811 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000105_2|CGC7
Gene ID: MGYG000000105_01267
Location and strand information: 458827 - 460239 (+)
Family: 2.A.2.3.2
Protein type: TC
Protein description: Glucuronide carrier protein

Gene clsuter ID: MGYG000000105_2|CGC7
Gene ID: MGYG000000105_01268
Location and strand information: 460267 - 463038 (+)
Family: GH10|GH43_12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.0443
Protein molecular weight: 103098.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000105_2|CGC7
Gene ID: MGYG000000105_01269
Location and strand information: 463095 - 464066 (+)
Family: GH43_1|GH43
Protein type: CAZyme
Protein description: Xylosidase/arabinosidase
Protein isoelectric point: 4.8187
Protein molecular weight: 36937.53
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000105_2|CGC7
Gene ID: MGYG000000105_01270
Location and strand information: 464080 - 466113 (+)
Family: GH67
Protein type: CAZyme
Protein description: Extracellular xylan exo-alpha-(1->2)-glucuronosidase
Protein isoelectric point: 7.4286
Protein molecular weight: 77645.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000105_2|CGC7
Gene ID: MGYG000000105_01271
Location and strand information: 466349 - 468208 (-)
Family: 2.A.47.4.8
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000105_01256	Vitamin B12 import ATP-binding protein BtuD	TC	435877	436521	+	3.A.1.12.5
MGYG000000105_01257	hypothetical protein	null	436544	437761	+	No domain
MGYG000000105_01258	hypothetical protein	CAZyme	437796	439142	-	GH28
MGYG000000105_01259	hypothetical protein	CAZyme	439195	441948	-	PL40
MGYG000000105_01260	Sensor histidine kinase RcsC	TF	442042	446130	-	HTH_AraC
MGYG000000105_01261	TonB-dependent receptor SusC	TC	446456	449599	+	1.B.14.6.1
MGYG000000105_01262	SusD-like protein	null	449621	451354	+	SusD-like_3\| SusD_RagB
MGYG000000105_01263	hypothetical protein	null	451370	452770	+	SGBP_B_XBD
MGYG000000105_01264	hypothetical protein	CAZyme	452799	455114	+	GH10\| 3.2.1.8\| CBM4
MGYG000000105_01265	hypothetical protein	CAZyme	455387	457123	+	GH35
MGYG000000105_01266	hypothetical protein	null	457159	458811	+	SASA\| Glyco_hydro_2_N\| SASA
MGYG000000105_01267	Glucuronide carrier protein	TC	458827	460239	+	2.A.2.3.2
MGYG000000105_01268	hypothetical protein	CAZyme	460267	463038	+	GH10\| GH43_12
MGYG000000105_01269	Xylosidase/arabinosidase	CAZyme	463095	464066	+	GH43_1\| GH43
MGYG000000105_01270	Extracellular xylan exo-alpha-(1->2)-glucuronosidase	CAZyme	464080	466113	+	GH67
MGYG000000105_01271	hypothetical protein	TC	466349	468208	-	2.A.47.4.8
Protein ID	Protein Name	Type	Start	End	Strand	Signature

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000105_01258	GH28_e66
MGYG000000105_01259
MGYG000000105_01264
MGYG000000105_01265	GH35_e19
MGYG000000105_01268	GH10_e61
MGYG000000105_01269	GH43_e85\|3.2.1.55\|3.2.1.37	xylan
MGYG000000105_01270	GH67_e0\|3.2.1.139\|3.2.1.131\|3.2.1.-	xylan